Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5549: 13917 - K00027 ME2, sfcA, maeA malate dehydrogenase (oxaloacetate-decarboxylating), at 349196 to 351953 13917 mRNA_5550: 13918 - K09424 REB1 Myb-like DNA-binding protein REB1, at 353365 to 355997 13918 mRNA_5551: 13919 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 356341 to 358990 13919 mRNA_5552: 13920 - K03360 GRR1 F-box and leucine-rich repeat protein GRR1, at 359863 to 362993 13920 mRNA_5553: 13921 - K20791 NAA10_11, ARD1_2 N-alpha-acetyltransferase 10/11, at 363195 to 364083 13921
Group Condition mRNA_5549 mRNA_5550 mRNA_5551 mRNA_5552 mRNA_5553
13917
13918
13919
13920
13921
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -2.0 -0.4 -0.9  
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -1.3 -0.5 -1.4  
growth on ypd YPD -0.1 -2.5 -0.2 0.8  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -1.8 0.0 -0.1  
auxotrophy Dropout Complete 0.5 -0.2 0.2 -1.6  
ypd buoyancy 40 hrs High Buoyancy 0.3 -1.0 -0.1 -0.3  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.8 -0.0 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.2 0.2 -0.8  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.6 0.0 0.1  
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.9 0.2 -1.7  
facs on lipid accumulation Sorted Low BODIPY Gate -0.5 -1.1 -0.1 1.3  
growth on oleic acid YNB Glucose -0.2 0.4 -0.0 -0.4  
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.5 0.1 -0.9  
growth on ricinoleic acid YNB Glucose -0.1 -0.0 0.0 0.1  
auxotrophy YNB Glucose 75mM Methionine 0.5 -0.3 0.4 -0.5  
auxotrophy YNB Glucose 75mM Arginine 0.4 0.2 0.4 -0.8  
growth on oleic acid YNB Oleic Acid -0.2 0.9 0.1 -0.5  
auxotrophy YNB Glucose 0.3 0.9 0.2 -0.9  
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.8 -0.2 -0.3  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 1.3 0.3 -0.7  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.3 -0.3 1.9  
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