Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5548: 13916 - KOG4006 Anti-proliferation factor BTG1/TOB, at 346631 to 348391 13916 mRNA_5549: 13917 - K00027 ME2, sfcA, maeA malate dehydrogenase (oxaloacetate-decarboxylating), at 349196 to 351953 13917 mRNA_5550: 13918 - K09424 REB1 Myb-like DNA-binding protein REB1, at 353365 to 355997 13918 mRNA_5551: 13919 - ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,SUPERFAMILY--SSF56112, at 356341 to 358990 13919 mRNA_5552: 13920 - K03360 GRR1 F-box and leucine-rich repeat protein GRR1, at 359863 to 362993 13920
Group Condition mRNA_5548 mRNA_5549 mRNA_5550 mRNA_5551 mRNA_5552
13916
13917
13918
13919
13920
facs on lipid accumulation Sorted High BODIPY Gate -0.9 -0.4 -2.0 -0.4 -0.9
ypd buoyancy 40 hrs No Buoyancy Separation -1.1 0.3 -1.3 -0.5 -1.4
growth on ypd YPD 0.1 -0.1 -2.5 -0.2 0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.2 -1.8 0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9 -0.5 -1.1 -0.1 1.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.2 -0.8 -0.0 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.0 -0.6 0.0 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.2 -0.2 0.2 -0.8
ypd buoyancy 40 hrs High Buoyancy 0.6 0.3 -1.0 -0.1 -0.3
auxotrophy Dropout Complete 1.1 0.5 -0.2 0.2 -1.6
growth on oleic acid YNB Glucose 0.5 -0.2 0.4 -0.0 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.7 0.2 0.5 0.1 -0.9
ypd buoyancy 40 hrs Median Buoyancy 0.4 0.1 0.8 -0.2 -0.3
growth on ricinoleic acid YNB Glucose 0.9 -0.1 -0.0 0.0 0.1
auxotrophy YNB Glucose 75mM Methionine 1.2 0.5 -0.3 0.4 -0.5
auxotrophy YNB Glucose 75mM Arginine 1.3 0.4 0.2 0.4 -0.8
growth on oleic acid YNB Oleic Acid 1.2 -0.2 0.9 0.1 -0.5
auxotrophy YNB Glucose 1.2 0.3 0.9 0.2 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.4 -0.2 -0.3 -0.3 1.9
growth on ricinoleic acid YNB Ricinoleic Acid 2.1 0.2 0.9 0.2 -1.7
growth on ricinoleic acid YNB Methylricinoleic Acid 1.6 -0.0 1.3 0.3 -0.7
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