Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5540: 13908 - Interpro GDP-fucose protein O-fucosyltransferase, at 330944 to 333027 13908 mRNA_5541: 13909 - K02482 K02482 two-component system, NtrC family, sensor kinase, at 333432 to 336799 13909 mRNA_5542: 13910 - Hypothetical Protein, at 336976 to 338321 13910 mRNA_5543: 13911 - K15190 MEPCE, BCDIN3 7SK snRNA methylphosphate capping enzyme, at 338637 to 339590 13911 mRNA_5544: 13912 - Hypothetical Protein, at 340231 to 341133 13912
Group Condition mRNA_5540 mRNA_5541 mRNA_5542 mRNA_5543 mRNA_5544
13908
13909
13910
13911
13912
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.8 -0.0 1.1 -2.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.4 -0.1 0.8 -0.8
facs on lipid accumulation Sorted High BODIPY Gate 0.9 0.0 -0.0 -0.8 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.2 -0.1 0.1 0.2
growth on oleic acid YNB Glucose 0.4 -0.1 0.0 -0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.7 -0.2 0.4 0.1 -0.6
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.2 0.0 0.1 0.4
auxotrophy YNB Glucose 0.7 0.1 -0.1 -0.4 0.2
facs on lipid accumulation Sorted No BODIPY Gate 1.1 -0.2 0.3 -0.7 -0.0
growth on ypd YPD 0.7 0.5 0.5 -0.9 -0.2
growth on oleic acid YNB Oleic Acid 1.0 -0.1 -0.0 0.1 -0.3
auxotrophy Dropout Complete 0.8 -0.0 0.4 -0.7 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.6 -0.1 1.5 -0.1
growth on ricinoleic acid YNB Glucose 1.1 -0.1 0.2 0.2 -0.5
auxotrophy YNB Glucose 75mM Arginine 0.5 -0.0 0.1 0.4 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.2 -0.1 1.6 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.1 0.1 0.4 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.7 -0.4 0.3 0.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.2 0.1 1.5 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 1.7 -0.2 0.1 0.7 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid 2.0 -0.1 0.1 0.8 -0.5
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