Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5530: 13898 - K02949 RP-S11e, RPS11 small subunit ribosomal protein S11e, at 309658 to 310320 13898 mRNA_5531: 13899 - K03800 lplA, lplJ lipoate---protein ligase, at 310956 to 312571 13899 mRNA_5532: 13900 - K01519 ITPA inosine triphosphate pyrophosphatase, at 312608 to 313852 13900 mRNA_5533: 13901 - Hypothetical Protein, at 314025 to 315738 13901 mRNA_5534: 13902 - K18798 AFG1, LACE1 peroxisome-assembly ATPase, at 315936 to 317983 13902
Group Condition mRNA_5530 mRNA_5531 mRNA_5532 mRNA_5533 mRNA_5534
13898
13899
13900
13901
13902
ypd buoyancy 40 hrs Low Buoyancy     -0.4 -1.2 -0.2
growth on oleic acid YNB Oleic Acid     0.0 -0.5 -1.2
growth on ricinoleic acid YNB Ricinoleic Acid     -0.1 -0.6 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation     -0.3 -0.8 0.2
growth on oleic acid YNB Glucose     -0.3 -0.4 -0.1
growth on ypd YPD     0.6 -0.5 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid     0.1 0.1 -0.4
ypd buoyancy 40 hrs Median Buoyancy     0.0 -0.5 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy     -0.3 0.4 -0.3
ypd buoyancy 40 hrs High Buoyancy     0.0 -0.2 0.2
auxotrophy Dropout Complete     -0.2 -0.2 0.6
facs on lipid accumulation Sorted High BODIPY Gate     -0.1 0.9 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy     -0.1 0.4 -0.0
facs on lipid accumulation Sorted No BODIPY Gate     0.2 0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine     0.1 -0.1 0.4
growth on ricinoleic acid YNB Glucose     0.4 -0.2 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy     0.1 -0.0 0.3
ypd buoyancy 40 hrs No Buoyancy Separation     0.2 0.1 0.2
auxotrophy YNB Glucose 75mM Arginine     -0.4 0.5 0.6
auxotrophy YNB Glucose     0.1 0.3 0.2
facs on lipid accumulation Sorted Low BODIPY Gate     0.0 0.7 0.7
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