Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5529: 13897 - K18045 SIW14, OCA3 tyrosine-protein phosphatase SIW14, at 306670 to 307631 13897 mRNA_5530: 13898 - K02949 RP-S11e, RPS11 small subunit ribosomal protein S11e, at 309658 to 310320 13898 mRNA_5531: 13899 - K03800 lplA, lplJ lipoate---protein ligase, at 310956 to 312571 13899 mRNA_5532: 13900 - K01519 ITPA inosine triphosphate pyrophosphatase, at 312608 to 313852 13900 mRNA_5533: 13901 - Hypothetical Protein, at 314025 to 315738 13901
Group Condition mRNA_5529 mRNA_5530 mRNA_5531 mRNA_5532 mRNA_5533
13897
13898
13899
13900
13901
ypd buoyancy 40 hrs Low Buoyancy -0.6     -0.4 -1.2
growth on oleic acid YNB Glucose -0.2     -0.3 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3     -0.3 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid -0.1     -0.1 -0.6
growth on oleic acid YNB Oleic Acid -0.2     0.0 -0.5
ypd buoyancy 40 hrs High Buoyancy -0.2     0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1     0.0 -0.5
auxotrophy Dropout Complete 0.1     -0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3     -0.1 0.4
auxotrophy YNB Glucose 75mM Methionine 0.3     0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.3     -0.4 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2     -0.3 0.4
growth on ypd YPD 0.2     0.6 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3     0.1 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5     0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.3     0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3     0.2 0.3
auxotrophy YNB Glucose 0.4     0.1 0.3
growth on ricinoleic acid YNB Glucose 0.7     0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.3     0.0 0.7
facs on lipid accumulation Sorted High BODIPY Gate 0.6     -0.1 0.9
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