Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5528: 13896 - HMMPfam-Protein of unknown function (DUF2416)-PF10315, at 305773 to 306425 13896 mRNA_5529: 13897 - K18045 SIW14, OCA3 tyrosine-protein phosphatase SIW14, at 306670 to 307631 13897 mRNA_5530: 13898 - K02949 RP-S11e, RPS11 small subunit ribosomal protein S11e, at 309658 to 310320 13898 mRNA_5531: 13899 - K03800 lplA, lplJ lipoate---protein ligase, at 310956 to 312571 13899 mRNA_5532: 13900 - K01519 ITPA inosine triphosphate pyrophosphatase, at 312608 to 313852 13900
Group Condition mRNA_5528 mRNA_5529 mRNA_5530 mRNA_5531 mRNA_5532
13896
13897
13898
13899
13900
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.6     -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -0.1     -0.1
growth on oleic acid YNB Oleic Acid -0.6 -0.2     0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5 0.2     -0.3
growth on oleic acid YNB Glucose -0.0 -0.2     -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3     -0.1
auxotrophy Dropout Complete -0.2 0.1     -0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 0.3     -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.3     0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.3     -0.3
ypd buoyancy 40 hrs High Buoyancy 0.4 -0.2     0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.6     -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.3     0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.5     0.1
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1     0.0
auxotrophy YNB Glucose 75mM Methionine -0.0 0.3     0.1
auxotrophy YNB Glucose -0.0 0.4     0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3     0.2
growth on ypd YPD 0.1 0.2     0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.6 0.3     0.2
growth on ricinoleic acid YNB Glucose 0.1 0.7     0.4
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