Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299170 to 301469 13893 mRNA_5526: 13894 - K00052 leuB 3-isopropylmalate dehydrogenase, at 301709 to 303276 13894 mRNA_5527: 13895 - K11883 NOB1 RNA-binding protein NOB1, at 303697 to 305493 13895 mRNA_5528: 13896 - HMMPfam-Protein of unknown function (DUF2416)-PF10315, at 305773 to 306425 13896 mRNA_5529: 13897 - K18045 SIW14, OCA3 tyrosine-protein phosphatase SIW14, at 306670 to 307631 13897
Group Condition mRNA_5525 mRNA_5526 mRNA_5527 mRNA_5528 mRNA_5529
13893
13894
13895
13896
13897
growth on oleic acid YNB Oleic Acid 0.0     -0.6 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.1     -0.2 -0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2     -0.1 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.2     -0.6 -0.1
growth on oleic acid YNB Glucose -0.1     -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0     -0.5 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0     -0.4 0.3
auxotrophy Dropout Complete 0.0     -0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1     -0.3 0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.2     -0.0 0.3
auxotrophy YNB Glucose 75mM Methionine -0.1     -0.0 0.3
auxotrophy YNB Glucose 75mM Arginine -0.1     0.0 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0     -0.3 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1     0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0     0.1 0.3
auxotrophy YNB Glucose -0.0     -0.0 0.4
growth on ypd YPD 0.0     0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1     0.2 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2     0.4 -0.2
growth on ricinoleic acid YNB Glucose 0.1     0.1 0.7
ypd buoyancy 40 hrs No Buoyancy Separation -0.0     0.6 0.3
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