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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297072 to 298317
13892
mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299170 to 301469
13893
mRNA_5526: 13894 - K00052 leuB 3-isopropylmalate dehydrogenase, at 301709 to 303276
13894
mRNA_5527: 13895 - K11883 NOB1 RNA-binding protein NOB1, at 303697 to 305493
13895
mRNA_5528: 13896 - HMMPfam-Protein of unknown function (DUF2416)-PF10315, at 305773 to 306425
13896
Group
Condition
mRNA_5524
mRNA_5525
mRNA_5526
mRNA_5527
mRNA_5528
13892
13893
13894
13895
13896
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.4
-0.0
-0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.5
-0.0
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.6
-0.2
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.5
-0.1
-0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.6
0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.1
0.0
-0.6
auxotrophy
YNB Glucose 75mM Arginine
-0.5
-0.1
0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.6
-0.1
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.1
-0.3
auxotrophy
YNB Glucose
-0.4
-0.0
-0.0
auxotrophy
Dropout Complete
-0.2
0.0
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.0
growth on oleic acid
YNB Glucose
-0.2
-0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.0
-0.0
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.2
-0.6
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.1
0.2
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.0
0.1
growth on ricinoleic acid
YNB Glucose
0.0
0.1
0.1
growth on ypd
YPD
0.2
0.0
0.1
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.2
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.0
0.6
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