Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5523: 13891 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 295158 to 296227 13891 mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297072 to 298317 13892 mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299170 to 301469 13893 mRNA_5526: 13894 - K00052 leuB 3-isopropylmalate dehydrogenase, at 301709 to 303276 13894 mRNA_5527: 13895 - K11883 NOB1 RNA-binding protein NOB1, at 303697 to 305493 13895
Group Condition mRNA_5523 mRNA_5524 mRNA_5525 mRNA_5526 mRNA_5527
13891
13892
13893
13894
13895
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.6 0.1    
facs on lipid accumulation Sorted Low BODIPY Gate -0.4 -0.2 -0.2    
facs on lipid accumulation Sorted No BODIPY Gate -0.7 0.1 -0.0    
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.0 -0.0    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.6 -0.2    
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.5 -0.0    
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.2 0.1    
auxotrophy YNB Glucose 75mM Methionine 0.3 -0.5 -0.1    
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.4 -0.0    
auxotrophy YNB Glucose 75mM Arginine 0.4 -0.5 -0.1    
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.1 -0.0    
auxotrophy YNB Glucose 0.3 -0.4 -0.0    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.6 -0.1    
growth on oleic acid YNB Oleic Acid -0.1 -0.1 0.0    
growth on oleic acid YNB Glucose 0.3 -0.2 -0.1    
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 -0.1 -0.1    
auxotrophy Dropout Complete 0.3 -0.2 0.0    
ypd buoyancy 40 hrs High Buoyancy -0.0 -0.0 0.2    
growth on ypd YPD 0.1 0.2 0.0    
growth on ricinoleic acid YNB Glucose 0.2 0.0 0.1    
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.3 0.2    
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