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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291900 to 293030
13889
mRNA_5522: 13890 - ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 293520 to 294673
13890
mRNA_5523: 13891 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF57850, at 295158 to 296227
13891
mRNA_5524: 13892 - KOG3002 Zn finger protein, at 297072 to 298317
13892
mRNA_5525: 13893 - HMMPfam-Xyloglucan fucosyltransferase-PF03254, at 299170 to 301469
13893
Group
Condition
mRNA_5521
mRNA_5522
mRNA_5523
mRNA_5524
mRNA_5525
13889
13890
13891
13892
13893
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.0
-0.5
-0.6
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.1
-0.4
-0.2
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.2
-0.1
0.0
-0.5
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.0
-0.7
0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.0
-0.3
-0.2
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
-0.7
-0.0
-0.0
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.4
-0.2
0.2
-0.6
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
-0.0
-0.0
0.2
growth on oleic acid
YNB Glucose
-0.1
-0.0
0.3
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.0
-0.0
-0.1
-0.1
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.0
0.0
0.4
-0.5
-0.1
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.4
0.3
-0.5
-0.1
auxotrophy
Dropout Complete
-0.1
0.2
0.3
-0.2
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.1
0.2
-0.4
-0.0
auxotrophy
YNB Glucose
0.1
0.3
0.3
-0.4
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.3
-0.0
0.2
-0.1
-0.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
0.3
-0.2
0.1
-0.0
growth on ricinoleic acid
YNB Glucose
0.1
-0.0
0.2
0.0
0.1
growth on ypd
YPD
0.2
-0.1
0.1
0.2
0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.1
0.0
0.3
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
0.2
0.5
-0.6
-0.1
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