Private Fitness
Home
Find Gene
BLAST
Experiments
Organisms
Help
Gene
Fitness
Nearby
Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
Add gene:
Go
Number of genes on each side:
1
2
3
4
5
Go
Top 21 experiments (either direction), sorted by average fitness
Or view
all 21 experiments
500 nt
mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287492 to 288002
13886
mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288669 to 289832
13887
mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290297 to 291417
13888
mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291900 to 293030
13889
mRNA_5522: 13890 - ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 293520 to 294673
13890
Group
Condition
mRNA_5518
mRNA_5519
mRNA_5520
mRNA_5521
mRNA_5522
13886
13887
13888
13889
13890
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.5
-0.4
-0.3
0.5
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.4
-0.2
-0.1
0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.3
-0.1
0.3
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.5
-0.3
0.2
0.3
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.1
-0.1
-0.1
-0.0
growth on oleic acid
YNB Glucose
0.3
-0.1
-0.1
-0.1
-0.0
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.2
0.1
-0.0
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
-0.2
0.4
0.1
growth on oleic acid
YNB Oleic Acid
0.6
-0.1
-0.2
-0.0
-0.0
ypd buoyancy
40 hrs Median Buoyancy
0.7
-0.0
-0.1
-0.2
-0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.3
0.1
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
0.2
0.2
0.0
0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
0.1
0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.6
-0.2
0.1
0.1
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.9
-0.1
0.3
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.1
0.4
0.0
0.0
auxotrophy
Dropout Complete
0.6
0.0
0.3
-0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.4
-0.2
0.5
-0.0
0.4
growth on ypd
YPD
0.2
0.8
0.0
0.2
-0.1
auxotrophy
YNB Glucose
0.8
-0.1
0.2
0.1
0.3
facs on lipid accumulation
Sorted High BODIPY Gate
0.7
0.4
0.4
-0.1
0.2
remove
mRNA_5518
plot
remove
mRNA_5519
plot
remove
mRNA_5520
remove
mRNA_5521
plot
remove
mRNA_5522
plot