Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280339 to 282741 13885 mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287492 to 288002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288669 to 289832 13887 mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290297 to 291417 13888 mRNA_5521: 13889 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 291900 to 293030 13889
Group Condition mRNA_5517 mRNA_5518 mRNA_5519 mRNA_5520 mRNA_5521
13885
13886
13887
13888
13889
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.5 -0.4 -0.3 0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.1 -0.5 -0.3 0.2
growth on oleic acid YNB Glucose -0.2 0.3 -0.1 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.4 -0.2 -0.1 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.2 -0.1 -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.2 0.6 -0.1 -0.2 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.2 0.3 0.1 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 0.4 -0.2 0.1 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 -0.1 -0.3 -0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 0.3 0.1 0.1 0.1
growth on ricinoleic acid YNB Glucose -0.2 0.2 0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.0 -0.1 -0.2 0.4
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.7 -0.0 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 0.4 -0.2 0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 0.3 0.1 0.4 0.0
auxotrophy Dropout Complete -0.0 0.6 0.0 0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.6 -0.2 0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.9 -0.1 0.3 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.4 0.7 0.4 0.4 -0.1
auxotrophy YNB Glucose 0.1 0.8 -0.1 0.2 0.1
growth on ypd YPD 0.1 0.2 0.8 0.0 0.2
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