Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5516: 13884 - Hypothetical Protein, at 276264 to 277474 13884 mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280339 to 282741 13885 mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287492 to 288002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288669 to 289832 13887 mRNA_5520: 13888 - KOG0297 TNF receptor-associated factor, at 290297 to 291417 13888
Group Condition mRNA_5516 mRNA_5517 mRNA_5518 mRNA_5519 mRNA_5520
13884
13885
13886
13887
13888
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 0.2 -0.5 -0.4 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 -0.4 0.3 0.1 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.3 -0.4 -0.2 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 -0.4 0.2 0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.4 -0.1 -0.3 -0.1
growth on oleic acid YNB Glucose 0.1 -0.2 0.3 -0.1 -0.1
growth on oleic acid YNB Oleic Acid -0.2 -0.2 0.6 -0.1 -0.2
growth on ricinoleic acid YNB Glucose -0.2 -0.2 0.2 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.3 -0.0 -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.7 0.0 0.1 -0.5 -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 0.2 -0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 0.4 -0.2 0.1
auxotrophy Dropout Complete -0.4 -0.0 0.6 0.0 0.3
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.0 0.7 -0.0 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 0.3 0.1 0.4
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2 0.4 -0.2 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1 0.6 -0.2 0.1
growth on ypd YPD 0.0 0.1 0.2 0.8 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.1 0.9 -0.1 0.3
auxotrophy YNB Glucose 0.3 0.1 0.8 -0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.3 -0.4 0.7 0.4 0.4
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