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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5515: 13883 - K02738 PSMB6 20S proteasome subunit beta 1, at 275180 to 276108
13883
mRNA_5516: 13884 - Hypothetical Protein, at 276264 to 277474
13884
mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280339 to 282741
13885
mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287492 to 288002
13886
mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288669 to 289832
13887
Group
Condition
mRNA_5515
mRNA_5516
mRNA_5517
mRNA_5518
mRNA_5519
13883
13884
13885
13886
13887
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.7
0.2
-0.5
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.9
-0.4
0.3
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
-0.4
0.2
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.0
0.3
-0.4
-0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.4
-0.1
-0.3
growth on oleic acid
YNB Glucose
0.1
-0.2
0.3
-0.1
growth on ricinoleic acid
YNB Glucose
-0.2
-0.2
0.2
0.2
growth on oleic acid
YNB Oleic Acid
-0.2
-0.2
0.6
-0.1
auxotrophy
Dropout Complete
-0.4
-0.0
0.6
0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
0.3
-0.0
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.0
0.4
-0.2
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.2
0.4
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
0.7
0.0
0.1
-0.5
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.1
0.2
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
0.3
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.0
0.7
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
0.6
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.1
0.9
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.4
0.7
0.4
auxotrophy
YNB Glucose
0.3
0.1
0.8
-0.1
growth on ypd
YPD
0.0
0.1
0.2
0.8
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