Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5513: 13881 - KOG4178 Soluble epoxide hydrolase, at 272103 to 273154 13881 mRNA_5514: 13882 - K03031 PSMD8, RPN12 26S proteasome regulatory subunit N12, at 273277 to 274802 13882 mRNA_5515: 13883 - K02738 PSMB6 20S proteasome subunit beta 1, at 275180 to 276108 13883 mRNA_5516: 13884 - Hypothetical Protein, at 276264 to 277474 13884 mRNA_5517: 13885 - PRINTS-Proline rich extensin signature-PR01217, at 280339 to 282741 13885
Group Condition mRNA_5513 mRNA_5514 mRNA_5515 mRNA_5516 mRNA_5517
13881
13882
13883
13884
13885
growth on ricinoleic acid YNB Ricinoleic Acid 0.3     -0.9 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2     -0.7 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.4     0.3 -0.4
growth on oleic acid YNB Oleic Acid -0.0     -0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2     -0.7 0.2
auxotrophy Dropout Complete 0.2     -0.4 -0.0
growth on oleic acid YNB Glucose -0.0     0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5     0.2 0.1
growth on ricinoleic acid YNB Glucose 0.4     -0.2 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0     -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.0     0.1 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.1     0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1     -0.0 0.3
auxotrophy YNB Glucose 75mM Arginine 0.2     0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1     -0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1     0.0 0.1
growth on ypd YPD 0.2     0.0 0.1
auxotrophy YNB Glucose -0.0     0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.3     0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3     -0.3 0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.4     0.7 0.0
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