Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5511: 13879 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 267375 to 268513 13879 mRNA_5512: 13880 - HMMPfam-PB1 domain-PF00564,HMMPfam-CBS domain-PF00571,ProSiteProfiles-CBS domain profile.-PS51371,SMART-Domain in cystathionine beta-synthase and other proteins.-SM00116,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF54631, at 268970 to 271571 13880 mRNA_5513: 13881 - KOG4178 Soluble epoxide hydrolase, at 272103 to 273154 13881 mRNA_5514: 13882 - K03031 PSMD8, RPN12 26S proteasome regulatory subunit N12, at 273277 to 274802 13882 mRNA_5515: 13883 - K02738 PSMB6 20S proteasome subunit beta 1, at 275180 to 276108 13883
Group Condition mRNA_5511 mRNA_5512 mRNA_5513 mRNA_5514 mRNA_5515
13879
13880
13881
13882
13883
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.5   -0.1    
facs on lipid accumulation Sorted No BODIPY Gate 0.0   -0.5    
facs on lipid accumulation Sorted High BODIPY Gate -0.1   -0.4    
growth on oleic acid YNB Glucose -0.3   -0.0    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5   0.2    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   -0.1    
growth on oleic acid YNB Oleic Acid -0.2   -0.0    
auxotrophy YNB Glucose -0.2   -0.0    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.5   0.3    
ypd buoyancy 40 hrs Median Buoyancy -0.1   -0.0    
auxotrophy Dropout Complete -0.3   0.2    
auxotrophy YNB Glucose 75mM Methionine -0.1   0.1    
ypd buoyancy 40 hrs Low Buoyancy -0.1   0.1    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   0.2    
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.0    
auxotrophy YNB Glucose 75mM Arginine -0.1   0.2    
growth on ricinoleic acid YNB Ricinoleic Acid -0.2   0.3    
growth on ricinoleic acid YNB Glucose -0.2   0.4    
growth on ypd YPD 0.2   0.2    
facs on lipid accumulation Sorted Low BODIPY Gate 0.2   0.3    
ypd buoyancy 40 hrs No Buoyancy Separation 0.2   0.4    
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