Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5510: 13878 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 265643 to 266758 13878 mRNA_5511: 13879 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 267375 to 268513 13879 mRNA_5512: 13880 - HMMPfam-PB1 domain-PF00564,HMMPfam-CBS domain-PF00571,ProSiteProfiles-CBS domain profile.-PS51371,SMART-Domain in cystathionine beta-synthase and other proteins.-SM00116,SUPERFAMILY--SSF54277,SUPERFAMILY--SSF54631, at 268970 to 271571 13880 mRNA_5513: 13881 - KOG4178 Soluble epoxide hydrolase, at 272103 to 273154 13881 mRNA_5514: 13882 - K03031 PSMD8, RPN12 26S proteasome regulatory subunit N12, at 273277 to 274802 13882
Group Condition mRNA_5510 mRNA_5511 mRNA_5512 mRNA_5513 mRNA_5514
13878
13879
13880
13881
13882
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.0   -0.5  
ypd buoyancy 40 hrs Median Buoyancy -0.4 -0.1   -0.0  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.5   -0.1  
ypd buoyancy 40 hrs High Buoyancy -0.5 0.1   -0.0  
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.1   0.1  
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1   -0.4  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.2   -0.1  
auxotrophy YNB Glucose 0.3 -0.2   -0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.5 -0.5   0.2  
auxotrophy Dropout Complete 0.3 -0.3   0.2  
growth on oleic acid YNB Glucose 0.6 -0.3   -0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 -0.5   0.3  
growth on oleic acid YNB Oleic Acid 0.6 -0.2   -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.2   0.3  
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.1   0.2  
auxotrophy YNB Glucose 75mM Methionine 0.4 -0.1   0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 0.2   0.4  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.9 -0.2   0.2  
growth on ypd YPD 0.5 0.2   0.2  
growth on ricinoleic acid YNB Glucose 0.8 -0.2   0.4  
growth on ricinoleic acid YNB Ricinoleic Acid 1.0 -0.2   0.3  
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