Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5507: 13875 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 259685 to 261151 13875 mRNA_5508: 13876 - KOG0297 TNF receptor-associated factor, at 262441 to 263588 13876 mRNA_5509: 13877 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 264045 to 264907 13877 mRNA_5510: 13878 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 265643 to 266758 13878 mRNA_5511: 13879 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 267375 to 268513 13879
Group Condition mRNA_5507 mRNA_5508 mRNA_5509 mRNA_5510 mRNA_5511
13875
13876
13877
13878
13879
facs on lipid accumulation Sorted High BODIPY Gate -0.7 0.2 -1.1 0.1 -0.1
auxotrophy Dropout Complete -0.4 0.1 -0.4 0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.4 -0.9 -0.0 0.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.4 0.4 -0.2 1.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 -0.2 0.8 -0.4 -0.1
growth on oleic acid YNB Oleic Acid -0.5 -0.0 -0.1 0.6 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3 0.0 0.9 -0.4 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 0.3 -0.2 0.4 -0.1
growth on ricinoleic acid YNB Glucose -0.4 -0.1 0.0 0.8 -0.2
growth on oleic acid YNB Glucose -0.4 0.4 -0.1 0.6 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 -0.0 0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 0.1 1.2 -0.5 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.4 -0.2 -0.0 0.2
auxotrophy YNB Glucose 0.3 0.4 -0.2 0.3 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -1.0 0.5 0.6 0.9 -0.2
growth on ypd YPD 1.1 0.2 -0.6 0.5 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 0.3 1.3 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.9 -0.0 0.9 0.5 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 2.5 0.2 0.8 0.2 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 2.2 0.1 1.0 0.5 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy 2.1 0.2 1.2 0.3 -0.2
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