Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5505: 13873 - KOG0297 TNF receptor-associated factor, at 254457 to 255755 13873 mRNA_5506: 13874 - KOG2504 Monocarboxylate transporter, at 257318 to 259586 13874 mRNA_5507: 13875 - KOG0134 NADH-flavin oxidoreductase/12-oxophytodienoate reductase, at 259685 to 261151 13875 mRNA_5508: 13876 - KOG0297 TNF receptor-associated factor, at 262441 to 263588 13876 mRNA_5509: 13877 - ProSiteProfiles-Zinc finger RING-type profile.-PS50089,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF57850, at 264045 to 264907 13877
Group Condition mRNA_5505 mRNA_5506 mRNA_5507 mRNA_5508 mRNA_5509
13873
13874
13875
13876
13877
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.0 -1.4 0.4 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.0 -0.7 0.2 -1.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 0.0 0.4 -0.9
auxotrophy Dropout Complete 0.1 -0.0 -0.4 0.1 -0.4
growth on oleic acid YNB Oleic Acid -0.1 0.3 -0.5 -0.0 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.4 0.3 -0.2
growth on ricinoleic acid YNB Glucose 0.0 0.1 -0.4 -0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.8 0.3 0.1 0.4 -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.1 -0.4 -0.2 0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 0.2 -0.1 0.2 -0.0
growth on oleic acid YNB Glucose -0.1 0.3 -0.4 0.4 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4 0.5 -1.0 0.5 0.6
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.3 0.0 0.9
auxotrophy YNB Glucose -0.1 0.0 0.3 0.4 -0.2
growth on ypd YPD -0.0 0.3 1.1 0.2 -0.6
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 -0.4 0.1 1.2
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.5 0.8 0.3 1.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.1 1.9 -0.0 0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 2.1 0.2 1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.4 2.2 0.1 1.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.1 2.5 0.2 0.8
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