Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240567 to 242106 13867 mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242489 to 245110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245382 to 247759 13869 mRNA_5502: 13870 - Hypothetical Protein, at 247912 to 250557 13870 mRNA_5503: 13871 - HMMPfam-Chitin synthase III catalytic subunit-PF12271, at 251563 to 253057 13871
Group Condition mRNA_5499 mRNA_5500 mRNA_5501 mRNA_5502 mRNA_5503
13867
13868
13869
13870
13871
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 -0.1 -0.5 -0.1 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.3 -0.1 -0.1 -1.0
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.2 0.1 0.2 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 -0.2 0.3 -0.3 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.7 0.1 -0.3 0.3 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.3 0.1 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 0.2 1.0 -0.0 -0.8
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2 -0.2 -0.0 0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 0.4 0.1 -0.0 -0.8
growth on ypd YPD -0.3 0.1 0.3 -0.0 0.1
growth on ricinoleic acid YNB Glucose -0.2 -0.0 -0.3 0.1 0.5
auxotrophy YNB Glucose 75mM Methionine -0.6 0.1 -0.1 0.1 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 -0.4 0.4 -0.1 -0.4
auxotrophy Dropout Complete -0.5 0.2 -0.1 0.0 0.5
auxotrophy YNB Glucose -0.5 0.1 -0.2 0.1 0.9
auxotrophy YNB Glucose 75mM Arginine -0.1 0.2 -0.2 -0.1 0.7
growth on oleic acid YNB Glucose -0.5 0.2 0.4 0.0 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8 0.1 0.5 -0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 0.1 0.4 0.2 -0.2
growth on oleic acid YNB Oleic Acid -0.2 0.1 -0.1 0.5 0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 0.2 0.2 0.4 0.5
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