Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5496: 13864 - HMMPfam-HSF-type DNA-binding-PF00447,SUPERFAMILY--SSF46785, at 230916 to 233624 13864 mRNA_5497: 13865 - KOG3872 FOG FHA domain, at 236058 to 237247 13865 mRNA_5498: 13866 - Hypothetical Protein, at 238766 to 240187 13866 mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240567 to 242106 13867 mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242489 to 245110 13868
Group Condition mRNA_5496 mRNA_5497 mRNA_5498 mRNA_5499 mRNA_5500
13864
13865
13866
13867
13868
auxotrophy YNB Glucose -0.6 -0.5 -0.2 -0.5 0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.6 -0.2 -0.2 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.4 -0.1 -0.6 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.7 0.2 0.1 -0.5 0.2
auxotrophy Dropout Complete 0.3 -0.5 -0.3 -0.5 0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.1 -0.1 0.2
growth on ypd YPD -0.7 0.3 0.1 -0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.7 -0.2 -0.3 -0.7 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.9 -0.1 -0.4 -0.6 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.2 0.2 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.5 -0.1 0.1 0.3
ypd buoyancy 40 hrs High Buoyancy 0.5 -0.5 -0.0 0.2 0.4
ypd buoyancy 40 hrs Low Buoyancy 0.8 -0.3 -0.0 0.0 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.0 0.6 0.2 0.2 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 0.3 -0.0 0.6 -0.2
growth on oleic acid YNB Oleic Acid 1.3 -0.2 0.0 -0.2 0.1
growth on oleic acid YNB Glucose 1.4 0.1 -0.1 -0.5 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 -0.2 0.1 0.5 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.4 -0.1 0.8 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 1.0 0.3 0.2 -0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.1 0.0 0.2 0.7 -0.4
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