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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5496: 13864 - HMMPfam-HSF-type DNA-binding-PF00447,SUPERFAMILY--SSF46785, at 230916 to 233624
13864
mRNA_5497: 13865 - KOG3872 FOG FHA domain, at 236058 to 237247
13865
mRNA_5498: 13866 - Hypothetical Protein, at 238766 to 240187
13866
mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240567 to 242106
13867
mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242489 to 245110
13868
Group
Condition
mRNA_5496
mRNA_5497
mRNA_5498
mRNA_5499
mRNA_5500
13864
13865
13866
13867
13868
auxotrophy
YNB Glucose
-0.6
-0.5
-0.2
-0.5
0.1
growth on ricinoleic acid
YNB Glucose
-0.1
-0.6
-0.2
-0.2
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.0
-0.4
-0.1
-0.6
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-0.7
0.2
0.1
-0.5
0.2
auxotrophy
Dropout Complete
0.3
-0.5
-0.3
-0.5
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.2
-0.4
-0.1
-0.1
0.2
growth on ypd
YPD
-0.7
0.3
0.1
-0.3
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.7
-0.2
-0.3
-0.7
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.9
-0.1
-0.4
-0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
0.2
0.2
0.1
-0.2
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.5
-0.1
0.1
0.3
ypd buoyancy
40 hrs High Buoyancy
0.5
-0.5
-0.0
0.2
0.4
ypd buoyancy
40 hrs Low Buoyancy
0.8
-0.3
-0.0
0.0
0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.6
0.2
0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.3
-0.0
0.6
-0.2
growth on oleic acid
YNB Oleic Acid
1.3
-0.2
0.0
-0.2
0.1
growth on oleic acid
YNB Glucose
1.4
0.1
-0.1
-0.5
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
-0.2
0.1
0.5
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
0.4
-0.1
0.8
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
1.0
0.3
0.2
-0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
1.1
0.0
0.2
0.7
-0.4
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