Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5486: 13854 - K15695 RNF103, KF1 E3 ubiquitin-protein ligase RNF103, at 211057 to 213286 13854 mRNA_5487: 13855 - HMMPfam-Protein kinase domain-PF00069,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 213824 to 214622 13855 mRNA_5488: 13856 - K01078 E3.1.3.2 acid phosphatase, at 214884 to 216932 13856 mRNA_5489: 13857 - KOG1263 Multicopper oxidases, at 217387 to 219494 13857 mRNA_5490: 13858 - Hypothetical Protein, at 219614 to 220900 13858
Group Condition mRNA_5486 mRNA_5487 mRNA_5488 mRNA_5489 mRNA_5490
13854
13855
13856
13857
13858
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.5 0.0 0.2 -0.7
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.5 -0.1 0.4 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.4 -0.5 0.4 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1 -0.2 0.0 -0.5
growth on oleic acid YNB Oleic Acid -0.1 -0.4 0.2 -0.1 -0.0
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.1 0.2 -0.1 0.1
auxotrophy Dropout Complete -0.2 -0.0 -0.1 0.0 -0.0
growth on oleic acid YNB Glucose -0.0 -0.5 0.5 -0.0 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.1 0.1 -0.0 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.5 0.1 0.5 -0.0
growth on ricinoleic acid YNB Glucose 0.0 -0.0 0.1 0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.2 0.1 -0.0 0.4
auxotrophy YNB Glucose 75mM Arginine -0.1 0.0 0.2 0.1 0.1
auxotrophy YNB Glucose -0.3 0.1 0.1 0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 0.1 0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2 -0.0 0.0 0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.0 0.3 0.0 0.4
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 0.2 0.2 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.1 -0.1 0.1 0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.4 -0.1 0.3 0.7
growth on ypd YPD 0.2 0.6 0.5 -0.1 -0.1
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