Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192866 to 194409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194806 to 195878 13847 mRNA_5480: 13848 - Hypothetical Protein, at 198378 to 198864 13848 mRNA_5481: 13849 - KOG2710 Rho GTPase-activating protein, at 199332 to 200672 13849 mRNA_5482: 13850 - Hypothetical Protein, at 201045 to 202061 13850
Group Condition mRNA_5478 mRNA_5479 mRNA_5480 mRNA_5481 mRNA_5482
13846
13847
13848
13849
13850
auxotrophy Dropout Complete -0.7 -1.4 -0.2 0.2 0.1
auxotrophy YNB Glucose 75mM Arginine -0.6 -1.0 0.2 0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.3 -0.3 -0.2 -0.1
auxotrophy YNB Glucose -0.7 -0.8 -0.1 0.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7 -0.7 0.4 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.8 0.5 -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.9 -0.4 0.1 0.3 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.5 0.1 0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 -0.4 0.3 -0.1 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.9 0.1 -0.1 0.5 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.6 0.2 0.2 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.1 0.4 -0.7 -0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 -0.8 0.0 0.4 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.3 0.3 -0.0 0.0
growth on ypd YPD 0.2 -0.7 0.2 0.4 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 -0.1 0.2 -0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.4 0.6 0.5 -0.2
growth on oleic acid YNB Oleic Acid 0.2 0.2 -0.3 0.1 0.2
growth on ricinoleic acid YNB Glucose 0.1 -0.4 0.3 0.4 0.1
growth on oleic acid YNB Glucose 0.5 -0.1 0.1 0.3 -0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 0.3 0.3 0.3 0.1
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