Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5475: 13843 - KOG0084 GTPase Rab1/YPT1, small G protein superfamily, and related GTP-binding proteins, at 181752 to 183361 13843 mRNA_5476: 13844 - KOG4719 Nuclear pore complex protein, at 183800 to 188314 13844 mRNA_5477: 13845 - K20179 VPS11, PEP5 vacuolar protein sorting-associated protein 11, at 188584 to 192714 13845 mRNA_5478: 13846 - SUPERFAMILY--SSF81383, at 192866 to 194409 13846 mRNA_5479: 13847 - KOG3070 Predicted RNA-binding protein containing PIN domain and invovled in translation or RNA processing, at 194806 to 195878 13847
Group Condition mRNA_5475 mRNA_5476 mRNA_5477 mRNA_5478 mRNA_5479
13843
13844
13845
13846
13847
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.3 -2.3 -0.9 -0.4
auxotrophy Dropout Complete -0.4 0.0 -1.1 -0.7 -1.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -1.3 -0.9 -0.2 -0.5
auxotrophy YNB Glucose -0.2 -0.2 -1.3 -0.7 -0.8
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 -1.1 -0.6 -1.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.7 -1.3 0.5 -0.8
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -1.0 -0.9 -0.1 -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.3 -1.0 -0.4 -0.8
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -1.7 0.3 -0.9 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.1 -0.4 -0.7 -0.7
growth on ypd YPD -0.1 -0.7 -0.8 0.2 -0.7
growth on ricinoleic acid YNB Methylricinoleic Acid -0.7 0.3 -0.9 -0.2 -0.4
growth on ricinoleic acid YNB Glucose -0.4 0.2 -0.3 0.1 -0.4
ypd buoyancy 40 hrs Low Buoyancy -0.5 0.2 0.4 -0.5 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 0.2 -0.4 0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.0 -1.3 0.3 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.2 -0.0 0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.2 -0.2 0.1 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.0 0.8 -0.3 -0.4
growth on oleic acid YNB Glucose -0.0 1.2 -0.1 0.5 -0.1
growth on oleic acid YNB Oleic Acid -0.3 1.3 0.1 0.2 0.2
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