Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_5466: 13834 - K05841 E2.4.1.173 sterol 3beta-glucosyltransferase, at 157808 to 163476 13834 mRNA_5467: 13835 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 165116 to 166451 13835 mRNA_5468: 13836 - Hypothetical Protein, at 166457 to 167011 13836 mRNA_5469: 13837 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 167116 to 168617 13837 mRNA_5470: 13838 - K00599 METTL6 methyltransferase-like protein 6, at 168838 to 170246 13838
Group Condition mRNA_5466 mRNA_5467 mRNA_5468 mRNA_5469 mRNA_5470
13834
13835
13836
13837
13838
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.9 -0.4 0.2 -0.5 0.1
auxotrophy Dropout Complete -0.2 -0.4 -0.3 0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.5 0.0 -0.2 -0.6 0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -0.3 -0.1 -0.3 0.3
auxotrophy YNB Glucose 75mM Methionine 0.2 0.2 -0.1 -0.3 -0.5
growth on oleic acid YNB Oleic Acid -0.0 -0.3 -0.2 0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.0 0.2 -0.4 -0.1
auxotrophy YNB Glucose -0.0 0.2 -0.0 -0.5 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.1 0.0 -0.1 -0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.1 0.4 0.1 -0.4 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.1 0.0 -0.3 0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.4 0.1 0.2 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 -0.4 -0.3 0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 0.2 0.2 -0.3 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.3 0.3 -0.4 -0.2
growth on ypd YPD 0.1 0.1 0.1 -0.3 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 0.0 0.4 0.0
growth on oleic acid YNB Glucose 0.0 0.2 -0.0 -0.3 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.0 0.1 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 0.3 -0.1 0.5
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.1 -0.3 0.3 0.3
remove
mRNA_5466
plot		 remove
mRNA_5467
plot		 remove
mRNA_5468		 remove
mRNA_5469
plot		 remove
mRNA_5470
plot