Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5465: 13833 - Hypothetical Protein, at 156189 to 157604 13833 mRNA_5466: 13834 - K05841 E2.4.1.173 sterol 3beta-glucosyltransferase, at 157808 to 163476 13834 mRNA_5467: 13835 - KOG4391 Predicted alpha/beta hydrolase BEM46, at 165116 to 166451 13835 mRNA_5468: 13836 - Hypothetical Protein, at 166457 to 167011 13836 mRNA_5469: 13837 - HMMPfam-Bacteriorhodopsin-like protein-PF01036,PRINTS-Bacterial opsin signature-PR00251,ProSitePatterns-Bacterial rhodopsins retinal binding site.-PS00327,ProSitePatterns-Bacterial rhodopsins signature 1.-PS00950,SMART-Bacteriorhodopsin-like protein-SM01021,SUPERFAMILY--SSF81321, at 167116 to 168617 13837
Group Condition mRNA_5465 mRNA_5466 mRNA_5467 mRNA_5468 mRNA_5469
13833
13834
13835
13836
13837
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 -0.9 -0.4 0.2 -0.5
auxotrophy Dropout Complete 0.0 -0.2 -0.4 -0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.6 -0.5 0.0 -0.2 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.6 -0.4 -0.3 -0.1 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.5 -0.2 0.2 0.2 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.3 0.1 0.0 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.2 -0.0 0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.3 0.2 0.2 -0.1 -0.3
auxotrophy YNB Glucose 0.1 -0.0 0.2 -0.0 -0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.4 -0.4 -0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.0 -0.1 0.3 -0.1
growth on ypd YPD -0.0 0.1 0.1 0.1 -0.3
growth on ricinoleic acid YNB Glucose 0.1 -0.1 0.4 0.1 -0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.1 0.1 0.0 -0.3
growth on oleic acid YNB Glucose 0.5 0.0 0.2 -0.0 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2 0.3 0.3 -0.4
growth on oleic acid YNB Oleic Acid 0.9 -0.0 -0.3 -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy 0.5 -0.1 -0.1 0.0 0.4
ypd buoyancy 40 hrs High Buoyancy 0.8 0.0 -0.4 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy 0.8 0.0 -0.0 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation 1.4 0.2 0.1 -0.3 0.3
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