Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_5448: 13816 - BLAST GQ67_01206T0 [Komagataella phaffii], at 116614 to 117202 13816 mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117409 to 118509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118824 to 121253 13818 mRNA_5451: 13819 - Hypothetical Protein, at 122441 to 123785 13819 mRNA_5452: 13820 - HMMPfam-Eukaryotic aspartyl protease-PF00026,PRINTS-Pepsin (A1) aspartic protease family signature-PR00792,ProSitePatterns-Eukaryotic and viral aspartyl proteases active site.-PS00141,SUPERFAMILY--SSF50630, at 124272 to 125754 13820
Group Condition mRNA_5448 mRNA_5449 mRNA_5450 mRNA_5451 mRNA_5452
13816
13817
13818
13819
13820
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3 -0.4 0.0 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.4 -0.1 -0.1 -0.1 0.2
auxotrophy YNB Glucose 75mM Methionine -0.0 -0.1 -0.2 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.3 -0.1 0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.1 0.4 0.0 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.2 0.1 -0.2 -0.2 0.3
growth on ypd YPD -0.1 -0.2 0.1 0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.5 0.2 -0.1 0.1 0.2
auxotrophy Dropout Complete 0.0 -0.0 -0.2 -0.1 0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.1 -0.1 0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 0.3 -0.2 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.2 -0.0 -0.1 -0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.2 -0.2 0.1 0.2
growth on oleic acid YNB Oleic Acid -0.0 0.3 -0.2 -0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.3 0.0 0.1 0.1
growth on oleic acid YNB Glucose -0.0 0.3 0.0 -0.0 0.2
auxotrophy YNB Glucose 0.0 -0.0 -0.1 0.0 0.5
growth on ricinoleic acid YNB Glucose 0.1 0.0 -0.4 0.2 0.4
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2 0.1 0.1 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 -0.2 0.1 0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2 -0.0 0.0 0.7
remove
mRNA_5448
plot
remove
mRNA_5449
plot
remove
mRNA_5450
remove
mRNA_5451
plot
remove
mRNA_5452
plot