Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5447: 13815 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 113720 to 116134 13815 mRNA_5448: 13816 - BLAST GQ67_01206T0 [Komagataella phaffii], at 116614 to 117202 13816 mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117409 to 118509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118824 to 121253 13818 mRNA_5451: 13819 - Hypothetical Protein, at 122441 to 123785 13819
Group Condition mRNA_5447 mRNA_5448 mRNA_5449 mRNA_5450 mRNA_5451
13815
13816
13817
13818
13819
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2 -0.3 -0.4 0.0
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.2 0.1 -0.2 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.0 -0.1 -0.2 -0.2
auxotrophy Dropout Complete -0.2 0.0 -0.0 -0.2 -0.1
auxotrophy YNB Glucose -0.2 0.0 -0.0 -0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.0 -0.5 0.2 -0.1 0.1
growth on ypd YPD -0.1 -0.1 -0.2 0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 -0.4 -0.1 -0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.2 -0.0 -0.1 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation -0.1 -0.2 -0.1 0.4 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1 0.1 -0.2 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 0.2 -0.0 0.0
growth on ricinoleic acid YNB Glucose 0.1 0.1 0.0 -0.4 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.3 0.3 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.7 -0.2 -0.3 -0.1 0.1
growth on oleic acid YNB Oleic Acid 0.3 -0.0 0.3 -0.2 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 0.3 0.0 0.1
ypd buoyancy 40 hrs High Buoyancy -0.1 0.0 0.2 0.1 0.1
growth on oleic acid YNB Glucose 0.2 -0.0 0.3 0.0 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 -0.1 0.2 -0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8 -0.2 0.1 -0.1 0.2
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