Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5446: 13814 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 113170 to 113689 13814 mRNA_5447: 13815 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 113720 to 116134 13815 mRNA_5448: 13816 - BLAST GQ67_01206T0 [Komagataella phaffii], at 116614 to 117202 13816 mRNA_5449: 13817 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 117409 to 118509 13817 mRNA_5450: 13818 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 118824 to 121253 13818
Group Condition mRNA_5446 mRNA_5447 mRNA_5448 mRNA_5449 mRNA_5450
13814
13815
13816
13817
13818
ypd buoyancy 40 hrs Low Buoyancy   0.1 -0.2 -0.3 -0.4
auxotrophy YNB Glucose 75mM Arginine   -0.2 -0.2 0.1 -0.2
auxotrophy Dropout Complete   -0.2 0.0 -0.0 -0.2
auxotrophy YNB Glucose 75mM Methionine   -0.1 -0.0 -0.1 -0.2
auxotrophy YNB Glucose   -0.2 0.0 -0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate   0.0 -0.5 0.2 -0.1
growth on ypd YPD   -0.1 -0.1 -0.2 0.1
growth on ricinoleic acid YNB Glucose   0.1 0.1 0.0 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1 0.1 0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy   -0.1 0.2 -0.0 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   -0.1 -0.2 -0.1 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.6 -0.4 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.1 -0.3 0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2 0.1 0.2 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.7 -0.2 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy   -0.1 0.0 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate   0.1 -0.1 0.3 0.0
growth on oleic acid YNB Oleic Acid   0.3 -0.0 0.3 -0.2
growth on oleic acid YNB Glucose   0.2 -0.0 0.3 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.7 -0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.8 -0.2 0.1 -0.1
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