Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_5444: 13812 - HMMPfam-Eukaryotic cytochrome b561-PF03188,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665, at 108625 to 109612 13812 mRNA_5445: 13813 - K07513 ACAA1 acetyl-CoA acyltransferase 1, at 110701 to 112520 13813 mRNA_5446: 13814 - HMMPfam-Stress responsive A/B Barrel Domain-PF07876,ProSiteProfiles-Stress-response A/B barrel domain profile.-PS51502,SMART-Stress responsive A/B Barrel Domain-SM00886,SUPERFAMILY--SSF54909, at 113170 to 113689 13814 mRNA_5447: 13815 - HMMPfam-MYND finger-PF01753,ProSitePatterns-Zinc finger MYND-type signature.-PS01360,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 113720 to 116134 13815 mRNA_5448: 13816 - BLAST GQ67_01206T0 [Komagataella phaffii], at 116614 to 117202 13816
Group Condition mRNA_5444 mRNA_5445 mRNA_5446 mRNA_5447 mRNA_5448
13812
13813
13814
13815
13816
growth on oleic acid YNB Oleic Acid 0.2 -2.5   0.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 -1.7   -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -1.6   -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.4   -0.2 -0.2
auxotrophy YNB Glucose -0.1 -0.1   -0.2 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.2   -0.1 -0.2
auxotrophy Dropout Complete 0.1 -0.3   -0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1   -0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.3   0.1 -0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.1   0.1 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2   -0.1 -0.0
growth on ypd YPD -0.1 0.2   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.2   0.8 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2 0.0   0.6 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1   -0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.4 -0.1   0.1 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.2   0.7 -0.2
growth on oleic acid YNB Glucose 0.3 -0.3   0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.0   0.7 -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.6 0.1   0.0 -0.5
growth on ricinoleic acid YNB Glucose 0.5 -0.2   0.1 0.1
remove
mRNA_5444
plot		 remove
mRNA_5445
plot		 remove
mRNA_5446		 remove
mRNA_5447
plot		 remove
mRNA_5448
plot