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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5429: 13797 - K01067 E3.1.2.1, ACH1 acetyl-CoA hydrolase, at 79557 to 82396
13797
mRNA_5430: 13798 - HMMPfam-Putative methyltransferase-PF10294,SUPERFAMILY--SSF53335, at 82627 to 84263
13798
mRNA_5431: 13799 - KOG1296 Uncharacterized conserved protein, at 84428 to 85305
13799
mRNA_5432: 13800 - Hypothetical Protein, at 86010 to 86874
13800
mRNA_5433: 13801 - BLAST UPF0658 Golgi apparatus membrane protein [Termitomyce..., at 87517 to 89164
13801
Group
Condition
mRNA_5429
mRNA_5430
mRNA_5431
mRNA_5432
mRNA_5433
13797
13798
13799
13800
13801
auxotrophy
Dropout Complete
-0.0
-0.7
0.1
-0.6
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.1
-0.5
-0.4
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.0
0.0
-0.1
-0.9
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
-0.0
-0.1
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
-0.3
-0.1
0.0
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
-0.2
-0.3
0.2
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.1
-0.2
-0.2
-0.1
auxotrophy
YNB Glucose
-0.1
-0.3
0.2
-0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
0.0
-0.4
0.4
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.3
-0.1
0.3
-0.2
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.0
-0.1
-0.1
-0.0
auxotrophy
YNB Glucose 75mM Methionine
0.2
-0.1
0.1
-0.1
-0.2
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.1
0.1
0.4
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
0.2
0.3
-0.3
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
0.4
0.0
0.5
-0.6
-0.2
growth on oleic acid
YNB Oleic Acid
-0.0
0.3
0.1
-0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.3
0.7
-0.2
-0.0
0.1
growth on ypd
YPD
-0.2
-0.4
0.2
1.0
-0.3
growth on oleic acid
YNB Glucose
0.1
0.3
0.3
-0.2
0.0
ypd buoyancy
40 hrs High Buoyancy
0.0
0.4
-0.0
0.6
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
0.3
0.8
-0.2
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