Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5417: 13785 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 53998 to 56725 13785 mRNA_5418: 13786 - K01502 E3.5.5.7 aliphatic nitrilase, at 56919 to 58432 13786 mRNA_5419: 13787 - Interpro Cut8, nuclear proteasome tether protein, at 58738 to 60106 13787 mRNA_5420: 13788 - Hypothetical Protein, at 60457 to 62427 13788 mRNA_5421: 13789 - Interpro Domain of unknown function (DUF5102) 0, at 62877 to 64571 13789
Group Condition mRNA_5417 mRNA_5418 mRNA_5419 mRNA_5420 mRNA_5421
13785
13786
13787
13788
13789
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0 -0.2 -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation 0.4 -0.3 -0.2 0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1 -0.0 0.0 -0.1
growth on ypd YPD -0.1 -0.0 0.2 0.1 -0.3
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 0.2 -0.1 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.1 0.1 0.1 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.0 0.2 0.2 -0.4
auxotrophy YNB Glucose 75mM Methionine -0.2 0.0 0.5 0.0 -0.1
auxotrophy YNB Glucose -0.4 0.1 0.3 -0.1 0.4
auxotrophy YNB Glucose 75mM Arginine -0.4 0.2 0.5 -0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.0 0.4 0.1 0.4
auxotrophy Dropout Complete -0.1 0.1 0.5 -0.2 0.7
growth on oleic acid YNB Glucose -0.1 0.1 0.9 0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.1 -0.1 0.4 0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 0.6 -0.2 0.7
growth on oleic acid YNB Oleic Acid 0.0 0.1 1.0 0.2 0.2
growth on ricinoleic acid YNB Glucose 0.1 0.3 0.3 -0.1 1.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.0 0.4 0.2 1.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 0.4 0.0 1.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.0 0.4 0.4 1.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.3 0.5 0.4 1.2
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