Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5416: 13784 - K04496 CTBP C-terminal binding protein, at 52502 to 53852 13784 mRNA_5417: 13785 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 53998 to 56725 13785 mRNA_5418: 13786 - K01502 E3.5.5.7 aliphatic nitrilase, at 56919 to 58432 13786 mRNA_5419: 13787 - Interpro Cut8, nuclear proteasome tether protein, at 58738 to 60106 13787 mRNA_5420: 13788 - Hypothetical Protein, at 60457 to 62427 13788
Group Condition mRNA_5416 mRNA_5417 mRNA_5418 mRNA_5419 mRNA_5420
13784
13785
13786
13787
13788
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 -0.0 -0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.1 -0.1 -0.0 0.0
growth on ypd YPD -0.2 -0.1 -0.0 0.2 0.1
auxotrophy YNB Glucose 0.1 -0.4 0.1 0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 -0.1 0.2 -0.1
auxotrophy Dropout Complete 0.0 -0.1 0.1 0.5 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.0 0.0 0.1 -0.1 0.4
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.4 0.2 0.5 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.1 0.0 0.4 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.1 0.0 0.4 0.2
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2 0.0 0.5 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1 0.1 0.6 -0.2
growth on ricinoleic acid YNB Glucose 0.1 0.1 0.3 0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.0 -0.0 0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.1 0.1 0.4 0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.9 0.4 -0.3 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.2 -0.0 0.4 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.6 0.2 0.1 0.1 0.1
growth on oleic acid YNB Glucose 0.3 -0.1 0.1 0.9 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.0 0.2 0.3 0.5 0.4
growth on oleic acid YNB Oleic Acid 0.2 0.0 0.1 1.0 0.2
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