Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_5413: 13781 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 43823 to 46039 13781 mRNA_5414: 13782 - HMMPfam-Glycosyl transferase family 2-PF13704, at 46162 to 47875 13782 mRNA_5415: 13783 - HMMPfam-Tyrosyl-DNA phosphodiesterase-PF06087,SUPERFAMILY--SSF56024, at 48943 to 50652 13783 mRNA_5416: 13784 - K04496 CTBP C-terminal binding protein, at 52502 to 53852 13784 mRNA_5417: 13785 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 53998 to 56725 13785
Group Condition mRNA_5413 mRNA_5414 mRNA_5415 mRNA_5416 mRNA_5417
13781
13782
13783
13784
13785
growth on ypd YPD 0.1 -0.0 -0.5 -0.2 -0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.3 0.1 0.2 -0.4
auxotrophy YNB Glucose 0.1 -0.1 0.1 0.1 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.1 -0.5 -0.2 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.0 0.0 0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.1 -0.2 0.4 0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.5 0.2 0.2 0.0
auxotrophy Dropout Complete 0.0 -0.0 0.1 0.0 -0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.1 0.2 -0.0 0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.1 0.2 -0.0 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.0 0.1 0.1 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.2 0.1 0.1 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.4 0.0 0.6 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.1 -0.1 -0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 0.1 0.2 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 -0.1 0.1 -0.0 0.2
growth on oleic acid YNB Glucose 0.2 -0.3 0.3 0.3 -0.1
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2 0.3 0.2 -0.2
growth on ricinoleic acid YNB Glucose 0.0 0.0 0.2 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.1 0.0 0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.3 -0.1 0.9 0.4
remove
mRNA_5413
plot		 remove
mRNA_5414
plot		 remove
mRNA_5415		 remove
mRNA_5416
plot		 remove
mRNA_5417
plot