Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5406: 13774 - KOG2742 Predicted oxidoreductase, at 26869 to 28382 13774 mRNA_5407: 13775 - K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+), at 28474 to 30165 13775 mRNA_5408: 13776 - HMMPfam-Protein kinase domain-PF00069,ProSitePatterns-Tyrosine protein kinases specific active-site signature.-PS00109,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 30441 to 31506 13776 mRNA_5409: 13777 - Hypothetical Protein, at 32747 to 36067 13777 mRNA_5410: 13778 - KOG2952 Cell cycle control protein, at 37061 to 38634 13778
Group Condition mRNA_5406 mRNA_5407 mRNA_5408 mRNA_5409 mRNA_5410
13774
13775
13776
13777
13778
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.2 -0.0  
auxotrophy Dropout Complete -0.0   -0.3 0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.1   0.0 -0.2  
facs on lipid accumulation Sorted Low BODIPY Gate 0.3   0.2 -0.5  
auxotrophy YNB Glucose 75mM Methionine -0.0   0.1 -0.1  
auxotrophy YNB Glucose 0.1   -0.1 0.0  
ypd buoyancy 40 hrs Median Buoyancy -0.1   0.1 0.0  
facs on lipid accumulation Sorted No BODIPY Gate 0.0   -0.1 0.1  
ypd buoyancy 40 hrs High Buoyancy -0.1   -0.0 0.2  
facs on lipid accumulation Sorted High BODIPY Gate 0.3   -0.1 -0.0  
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   0.5 -0.2  
growth on ypd YPD 0.2   -0.0 0.1  
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   0.7 -0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3   0.5 0.3  
growth on oleic acid YNB Glucose 0.2   0.3 0.1  
growth on ricinoleic acid YNB Glucose -0.1   0.5 0.4  
growth on oleic acid YNB Oleic Acid 0.2   0.7 0.0  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4   0.4 0.3  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5   0.3 0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4   0.5 0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7   0.3 0.4  
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