Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5403: 13771 - K00789 metK S-adenosylmethionine synthetase, at 18980 to 21610 13771 mRNA_5404: 13772 - Hypothetical Protein, at 22508 to 23850 13772 mRNA_5405: 13773 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 23970 to 26723 13773 mRNA_5406: 13774 - KOG2742 Predicted oxidoreductase, at 26869 to 28382 13774 mRNA_5407: 13775 - K15734 SDR16C5 all-trans-retinol dehydrogenase (NAD+), at 28474 to 30165 13775
Group Condition mRNA_5403 mRNA_5404 mRNA_5405 mRNA_5406 mRNA_5407
13771
13772
13773
13774
13775
auxotrophy YNB Glucose 75mM Methionine   0.0 -0.2 -0.0  
auxotrophy YNB Glucose   0.2 -0.4 0.1  
ypd buoyancy 40 hrs Median Buoyancy   0.0 -0.1 -0.1  
auxotrophy Dropout Complete   0.1 -0.2 -0.0  
ypd buoyancy 40 hrs Low Buoyancy   0.0 -0.2 0.1  
ypd buoyancy 40 hrs High Buoyancy   0.0 0.0 -0.1  
auxotrophy YNB Glucose 75mM Arginine   0.2 -0.2 -0.1  
ypd buoyancy 40 hrs No Buoyancy Separation   0.4 -0.1 -0.2  
growth on oleic acid YNB Oleic Acid   0.1 -0.2 0.2  
growth on ricinoleic acid YNB Methylricinoleic Acid   0.6 -0.3 -0.3  
growth on ricinoleic acid YNB Glucose   0.7 -0.3 -0.1  
facs on lipid accumulation Sorted High BODIPY Gate   -0.1 0.1 0.3  
facs on lipid accumulation Sorted No BODIPY Gate   0.0 0.2 0.0  
growth on oleic acid YNB Glucose   0.2 -0.1 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid   0.6 -0.2 -0.1  
facs on lipid accumulation Sorted Low BODIPY Gate   -0.1 0.2 0.3  
growth on ypd YPD   -0.0 0.4 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.3 0.1 0.4  
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.2 0.6 0.4  
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3 0.4 0.5  
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 0.6 0.7  
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