Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5401: 13769 - HMMPfam-Complex 1 protein (LYR family)-PF05347, at 15776 to 16734 13769 mRNA_5402: 13770 - KOG2938 Predicted inosine-uridine preferring nucleoside hydrolase, at 17110 to 18696 13770 mRNA_5403: 13771 - K00789 metK S-adenosylmethionine synthetase, at 18980 to 21610 13771 mRNA_5404: 13772 - Hypothetical Protein, at 22508 to 23850 13772 mRNA_5405: 13773 - K08869 ADCK, ABC1 aarF domain-containing kinase, at 23970 to 26723 13773
Group Condition mRNA_5401 mRNA_5402 mRNA_5403 mRNA_5404 mRNA_5405
13769
13770
13771
13772
13773
auxotrophy YNB Glucose -0.1 -0.5   0.2 -0.4
ypd buoyancy 40 hrs Median Buoyancy -0.3 -0.3   0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.2 -0.3   0.0 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.2   0.0 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.6 0.1   0.6 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2   0.0 -0.2
growth on ricinoleic acid YNB Glucose -0.4 -0.0   0.7 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1   0.6 -0.2
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.2   0.2 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -0.2   -0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.0   -0.1 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 0.1   0.4 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3 0.2   0.0 0.2
auxotrophy Dropout Complete 0.2 0.2   0.1 -0.2
growth on oleic acid YNB Oleic Acid 0.8 -0.0   0.1 -0.2
growth on oleic acid YNB Glucose 0.7 -0.1   0.2 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.3   0.3 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.1   0.2 0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.4   0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.5   0.3 0.6
growth on ypd YPD 0.6 0.3   -0.0 0.4
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