Fitness for 4 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5394: 13762 - SUPERFAMILY--SSF54897, at 121 to 1074 13762 mRNA_5395: 13763 - KOG4551 GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis, at 1148 to 1997 13763 mRNA_5396: 13764 - KOG4567 GTPase-activating protein, at 2092 to 5786 13764 mRNA_5397: 13765 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 6124 to 7635 13765
Group Condition mRNA_5394 mRNA_5395 mRNA_5396 mRNA_5397
13762
13763
13764
13765
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.4 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 -0.0 0.0 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate -0.3 -0.3 -0.2 0.3
auxotrophy Dropout Complete -0.1 -0.2 -0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 -0.2 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.2 -0.0 -0.0
auxotrophy YNB Glucose -0.1 -0.2 -0.3 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 -0.1 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.1 0.0 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.1 -0.2 0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.1 -0.1 0.1 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.1 0.1 -0.2 0.2
ypd buoyancy 40 hrs High Buoyancy -0.0 0.1 0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.1 -0.0 0.3
growth on ypd YPD 0.1 0.1 -0.1 -0.0
growth on ricinoleic acid YNB Glucose 0.0 -0.1 -0.2 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.3 -0.0 -0.0
growth on oleic acid YNB Glucose 0.1 0.1 0.1 0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.2 -0.3 1.2
growth on oleic acid YNB Oleic Acid 0.1 0.3 0.1 0.7
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 0.3 0.0 1.3
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