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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5382: 13750 - Hypothetical Protein, at 608792 to 609334
13750
mRNA_5383: 13751 - Hypothetical Protein, at 612955 to 613540
13751
mRNA_5384: 13752 - HMMPfam-RNase H-PF00075,ProSiteProfiles-RNase H domain profile.-PS50879,SUPERFAMILY--SSF53098, at 614894 to 615202
13752
mRNA_5385: 13753 - Hypothetical Protein, at 619262 to 620433
13753
mRNA_5386: 13754 - Hypothetical Protein, at 620472 to 621845
13754
Group
Condition
mRNA_5382
mRNA_5383
mRNA_5384
mRNA_5385
mRNA_5386
13750
13751
13752
13753
13754
growth on oleic acid
YNB Oleic Acid
-0.7
-0.0
-0.5
-0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
0.0
0.0
-0.3
-0.3
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.4
-0.0
-0.4
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.8
0.0
0.3
0.2
-1.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
0.0
-0.0
0.4
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.3
-0.1
0.0
-0.2
0.5
growth on oleic acid
YNB Glucose
-0.1
-0.1
-0.2
-0.1
0.5
growth on ypd
YPD
0.7
-0.2
-0.4
-0.0
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.5
0.2
-0.3
-0.4
0.3
auxotrophy
YNB Glucose
-0.8
0.1
-0.6
0.4
1.1
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
0.4
-0.8
0.1
0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.2
-0.7
0.3
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.1
-0.4
0.0
0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.7
0.2
-0.7
0.4
1.6
growth on ricinoleic acid
YNB Glucose
-0.2
0.0
0.0
-0.0
1.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
0.2
-0.2
1.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.4
0.2
-0.2
0.6
auxotrophy
YNB Glucose 75mM Methionine
-0.4
0.2
-0.4
0.3
1.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.1
0.0
0.2
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.6
0.3
0.3
0.4
0.4
auxotrophy
Dropout Complete
-0.2
0.0
-0.1
0.4
2.2
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