Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5370: 13738 - K18443 GBF1 golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, at 559592 to 565388 13738 mRNA_5371: 13739 - K03859 PIGC, GPI2 phosphatidylinositol glycan, class C, at 565702 to 566965 13739 mRNA_5372: 13740 - K04487 iscS, NFS1 cysteine desulfurase, at 567382 to 569979 13740 mRNA_5373: 13741 - Hypothetical Protein, at 571063 to 571885 13741 mRNA_5374: 13742 - KOG0001 Ubiquitin and ubiquitin-like proteins, at 571960 to 573012 13742
Group Condition mRNA_5370 mRNA_5371 mRNA_5372 mRNA_5373 mRNA_5374
13738
13739
13740
13741
13742
growth on ricinoleic acid YNB Ricinoleic Acid -0.5     -0.7 -0.8
ypd buoyancy 40 hrs No Buoyancy Separation -2.0     0.3 0.1
facs on lipid accumulation Sorted Low BODIPY Gate -1.4     -0.2 0.1
growth on oleic acid YNB Glucose -0.2     -0.4 -0.7
auxotrophy Dropout Complete -0.5     -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine -0.1     -0.4 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.7     0.4 -0.1
growth on oleic acid YNB Oleic Acid 0.5     -0.4 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3     0.1 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.3     0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.7     0.3 0.3
auxotrophy YNB Glucose 0.5     -0.4 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1     -0.3 -0.4
facs on lipid accumulation Sorted High BODIPY Gate -0.2     0.3 0.2
growth on ypd YPD 0.1     -0.2 0.5
auxotrophy YNB Glucose 75mM Arginine 0.5     -0.2 0.2
growth on ricinoleic acid YNB Glucose 1.3     -0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.5     0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 1.6     0.1 0.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy 2.2     0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 3.1     -0.1 0.2
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