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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5366: 13734 - KOG1752 Glutaredoxin and related proteins, at 550518 to 551881
13734
mRNA_5367: 13735 - K08838 STK24_25_MST4 serine/threonine-protein kinase 24/25/MST4, at 552284 to 555242
13735
mRNA_5368: 13736 - K09553 STIP1 stress-induced-phosphoprotein 1, at 555613 to 556991
13736
mRNA_5369: 13737 - K03627 MBF1 putative transcription factor, at 557510 to 559067
13737
mRNA_5370: 13738 - K18443 GBF1 golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, at 559592 to 565388
13738
Group
Condition
mRNA_5366
mRNA_5367
mRNA_5368
mRNA_5369
mRNA_5370
13734
13735
13736
13737
13738
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-0.0
-0.4
0.1
-2.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
0.2
-0.3
-0.0
-1.4
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
-0.1
0.2
-0.7
-0.2
growth on oleic acid
YNB Glucose
0.3
-0.1
0.1
-0.5
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.4
0.3
-0.2
-0.7
growth on ypd
YPD
-0.1
-0.4
0.3
0.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.3
0.2
0.3
-0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.8
0.3
-0.1
-0.2
-0.5
ypd buoyancy
40 hrs High Buoyancy
0.7
0.0
-0.4
0.3
-0.3
growth on oleic acid
YNB Oleic Acid
0.5
-0.4
0.1
0.0
0.5
ypd buoyancy
40 hrs Median Buoyancy
0.6
-0.2
0.1
1.7
-0.7
auxotrophy
Dropout Complete
0.3
-0.2
0.3
1.5
-0.5
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.2
-0.1
1.9
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
1.1
-0.1
0.2
0.1
1.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.8
0.3
0.1
1.3
1.6
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
0.5
0.2
-0.2
2.2
ypd buoyancy
40 hrs Low Buoyancy
0.6
-0.2
-0.0
1.6
0.5
growth on ricinoleic acid
YNB Glucose
0.3
0.1
0.0
0.9
1.3
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.1
0.7
2.3
-0.1
auxotrophy
YNB Glucose
0.4
0.1
0.7
1.2
0.5
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.3
0.6
0.4
0.6
3.1
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