Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5366: 13734 - KOG1752 Glutaredoxin and related proteins, at 550518 to 551881 13734 mRNA_5367: 13735 - K08838 STK24_25_MST4 serine/threonine-protein kinase 24/25/MST4, at 552284 to 555242 13735 mRNA_5368: 13736 - K09553 STIP1 stress-induced-phosphoprotein 1, at 555613 to 556991 13736 mRNA_5369: 13737 - K03627 MBF1 putative transcription factor, at 557510 to 559067 13737 mRNA_5370: 13738 - K18443 GBF1 golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1, at 559592 to 565388 13738
Group Condition mRNA_5366 mRNA_5367 mRNA_5368 mRNA_5369 mRNA_5370
13734
13735
13736
13737
13738
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -0.0 -0.4 0.1 -2.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 0.2 -0.3 -0.0 -1.4
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.1 0.2 -0.7 -0.2
growth on oleic acid YNB Glucose 0.3 -0.1 0.1 -0.5 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.4 0.3 -0.2 -0.7
growth on ypd YPD -0.1 -0.4 0.3 0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.3 0.2 0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.8 0.3 -0.1 -0.2 -0.5
ypd buoyancy 40 hrs High Buoyancy 0.7 0.0 -0.4 0.3 -0.3
growth on oleic acid YNB Oleic Acid 0.5 -0.4 0.1 0.0 0.5
ypd buoyancy 40 hrs Median Buoyancy 0.6 -0.2 0.1 1.7 -0.7
auxotrophy Dropout Complete 0.3 -0.2 0.3 1.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.2 -0.1 1.9 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 1.1 -0.1 0.2 0.1 1.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.8 0.3 0.1 1.3 1.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.5 0.2 -0.2 2.2
ypd buoyancy 40 hrs Low Buoyancy 0.6 -0.2 -0.0 1.6 0.5
growth on ricinoleic acid YNB Glucose 0.3 0.1 0.0 0.9 1.3
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.1 0.7 2.3 -0.1
auxotrophy YNB Glucose 0.4 0.1 0.7 1.2 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 0.6 0.4 0.6 3.1
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