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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5360: 13728 - HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658, at 539342 to 540520
13728
mRNA_5361: 13729 - K00511 SQLE, ERG1 squalene monooxygenase, at 541060 to 542859
13729
mRNA_5362: 13730 - Hypothetical Protein, at 543125 to 544034
13730
mRNA_5363: 13731 - KOG0254 Predicted transporter (major facilitator superfamily), at 544330 to 546394
13731
mRNA_5364: 13732 - KOG1630 Growth hormone-induced protein and related proteins, at 546685 to 547952
13732
Group
Condition
mRNA_5360
mRNA_5361
mRNA_5362
mRNA_5363
mRNA_5364
13728
13729
13730
13731
13732
ypd buoyancy
40 hrs No Buoyancy Separation
-0.6
-0.9
-2.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.1
-1.4
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.0
-1.5
0.1
growth on ypd
YPD
-0.0
-0.2
-1.3
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.4
0.0
-0.8
-0.0
growth on oleic acid
YNB Oleic Acid
-0.1
-0.1
-0.7
-0.3
facs on lipid accumulation
Sorted No BODIPY Gate
0.3
0.1
-1.5
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.1
-0.2
-0.7
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
0.1
-0.9
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.2
-0.1
-0.3
-0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
0.0
-0.9
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.0
-0.5
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.0
-0.3
-0.2
growth on oleic acid
YNB Glucose
0.1
-0.2
0.4
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.4
-0.0
-0.3
-0.1
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.0
0.1
-0.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.1
0.2
0.2
0.0
auxotrophy
Dropout Complete
-0.0
0.0
0.5
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.0
1.1
-0.2
auxotrophy
YNB Glucose
0.4
-0.1
1.3
-0.1
growth on ricinoleic acid
YNB Glucose
0.3
-0.1
1.7
-0.2
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