Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5359: 13727 - KOG0254 Predicted transporter (major facilitator superfamily), at 536738 to 538804 13727 mRNA_5360: 13728 - HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658, at 539342 to 540520 13728 mRNA_5361: 13729 - K00511 SQLE, ERG1 squalene monooxygenase, at 541060 to 542859 13729 mRNA_5362: 13730 - Hypothetical Protein, at 543125 to 544034 13730 mRNA_5363: 13731 - KOG0254 Predicted transporter (major facilitator superfamily), at 544330 to 546394 13731
Group Condition mRNA_5359 mRNA_5360 mRNA_5361 mRNA_5362 mRNA_5363
13727
13728
13729
13730
13731
facs on lipid accumulation Sorted No BODIPY Gate -0.8 0.3   0.1 -1.5
ypd buoyancy 40 hrs No Buoyancy Separation 1.7 -0.6   -0.9 -2.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.2   0.0 -1.5
growth on ypd YPD 0.3 -0.0   -0.2 -1.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 -0.4   0.1 -1.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 -0.4   0.0 -0.8
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.3   0.0 -0.9
growth on oleic acid YNB Oleic Acid -0.0 -0.1   -0.1 -0.7
ypd buoyancy 40 hrs High Buoyancy -0.8 -0.1   0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.1   -0.2 -0.7
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 0.2   0.0 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.5 -0.2   0.1 -0.9
ypd buoyancy 40 hrs Low Buoyancy 0.2 0.2   -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine 0.1 0.4   -0.0 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.4 0.3   -0.0 -0.5
auxotrophy Dropout Complete -0.3 -0.0   0.0 0.5
growth on oleic acid YNB Glucose 0.4 0.1   -0.2 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.1   0.2 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.1   -0.0 1.1
auxotrophy YNB Glucose -0.1 0.4   -0.1 1.3
growth on ricinoleic acid YNB Glucose 0.6 0.3   -0.1 1.7
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