Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5350: 13718 - K20310 TRAPPC13 trafficking protein particle complex subunit 13, at 515714 to 517641 13718 mRNA_5351: 13719 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 518393 to 520382 13719 mRNA_5352: 13720 - KOG1674 Cyclin, at 522797 to 523590 13720 mRNA_5353: 13721 - Hypothetical Protein, at 524345 to 526185 13721 mRNA_5354: 13722 - KOG0557 Dihydrolipoamide acetyltransferase, at 527210 to 528729 13722
Group Condition mRNA_5350 mRNA_5351 mRNA_5352 mRNA_5353 mRNA_5354
13718
13719
13720
13721
13722
facs on lipid accumulation Sorted High BODIPY Gate -0.1 -0.2   -0.2 -1.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1   -0.5 -1.1
growth on oleic acid YNB Glucose 0.1 0.1   -0.0 -1.2
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.3   -0.2 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 0.0   -0.4 -0.1
auxotrophy Dropout Complete 0.4 -0.3   -0.6 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2   -0.3 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.0   -0.1 -0.7
auxotrophy YNB Glucose 0.0 -0.2   -0.4 0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 0.2   0.1 -0.9
growth on ricinoleic acid YNB Glucose 0.1 0.2   -0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.2   -0.0 -0.3
growth on oleic acid YNB Oleic Acid -0.2 0.3   -0.1 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.2 0.2   -0.3 0.7
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.2   -0.3 0.4
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1   -0.3 0.9
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.4   0.2 0.6
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1   0.1 1.2
growth on ypd YPD 0.3 0.4   0.7 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.1   0.4 1.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.3   -0.3 2.4
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