Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5340: 13708 - K01092 E3.1.3.25, IMPA, suhB myo-inositol-1(or 4)-monophosphatase, at 493002 to 494592 13708 mRNA_5341: 13709 - KOG0692 Pentafunctional AROM protein, at 495239 to 496655 13709 mRNA_5342: 13710 - KOG0692 Pentafunctional AROM protein, at 496893 to 498783 13710 mRNA_5343: 13711 - K01835 pgm phosphoglucomutase, at 499617 to 502031 13711 mRNA_5344: 13712 - KOG4176 Uncharacterized conserved protein, at 502069 to 503147 13712
Group Condition mRNA_5340 mRNA_5341 mRNA_5342 mRNA_5343 mRNA_5344
13708
13709
13710
13711
13712
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 -0.7 -0.4 -0.3 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 -0.2 -0.1 -0.3
growth on ypd YPD -0.5 -0.0 0.0 -0.0 0.0
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 0.0 -0.1 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.1 -0.3 0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3 -0.5 -0.3 -0.1 0.6
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.4 -0.1 -0.1 0.4
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.1 -0.1 0.3 0.1
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 -0.1 0.3 0.2
auxotrophy Dropout Complete -0.1 0.0 -0.0 0.3 0.0
growth on ricinoleic acid YNB Glucose 0.2 -0.1 -0.0 0.1 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 -0.0 -0.0 0.1 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 -0.4 -0.0 -0.1 0.6
growth on oleic acid YNB Oleic Acid -0.0 0.1 -0.1 0.1 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.2 0.3 0.4 -0.2
growth on oleic acid YNB Glucose 0.0 0.0 -0.2 0.5 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 -0.1 -0.4 -0.1 1.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.0 -0.2 0.3 0.4
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.1 0.5 0.3 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.0 0.3 0.3 0.1
auxotrophy YNB Glucose -0.1 -0.1 0.2 0.3 0.5
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