Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5331: 13699 - SUPERFAMILY--SSF52047, at 473951 to 475290 13699 mRNA_5332: 13700 - K01904 4CL 4-coumarate--CoA ligase, at 475424 to 477955 13700 mRNA_5333: 13701 - ProSiteProfiles-Ribonuclease III family domain profile.-PS50142,SUPERFAMILY--SSF69065, at 478191 to 479250 13701 mRNA_5334: 13702 - K14563 NOP1, FBL rRNA 2'-O-methyltransferase fibrillarin, at 479497 to 481330 13702 mRNA_5335: 13703 - HMMPfam-Domain of unknown function (DUF4202)-PF13875, at 481630 to 482657 13703
Group Condition mRNA_5331 mRNA_5332 mRNA_5333 mRNA_5334 mRNA_5335
13699
13700
13701
13702
13703
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.0 -0.3 -1.1 -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.2 -0.1 -1.2 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.2 -0.0 -0.4 -0.0
growth on oleic acid YNB Oleic Acid 0.1 -0.1 -0.2 -1.2 0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.3 -0.1 -0.5 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0 -0.0 -0.1 -0.5 0.1
growth on ricinoleic acid YNB Glucose -0.1 0.1 -0.0 0.2 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.3 0.1 0.1 0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 0.3 -0.3 0.2
growth on oleic acid YNB Glucose -0.2 -0.1 -0.1 0.2 0.5
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.1 -0.4 0.6 0.2
auxotrophy Dropout Complete -0.0 -0.3 -0.1 -0.2 1.0
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.3 0.5 -0.3 0.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 0.2 -0.1 -0.4 0.5
growth on ypd YPD -0.5 -0.3 -0.1 1.5 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.1 0.3 1.7 -0.9
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.1 0.2 0.4 0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 0.4 -0.0 1.7 -0.6
auxotrophy YNB Glucose -0.0 -0.3 0.3 -0.0 1.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.3 0.2 0.0 2.0 -0.5
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 0.3 0.0 2.1 -0.1
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