Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5322: 13690 - K01120 cpdP 3',5'-cyclic-nucleotide phosphodiesterase, at 452870 to 455692 13690 mRNA_5323: 13691 - K10842 MNAT1 CDK-activating kinase assembly factor MAT1, at 456066 to 457717 13691 mRNA_5324: 13692 - KOG2852 Possible oxidoreductase, at 457858 to 459287 13692 mRNA_5325: 13693 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,ProSiteProfiles-Prokaryotic membrane lipoprotein lipid attachment site profile.-PS51257,SUPERFAMILY--SSF52266, at 459771 to 461459 13693 mRNA_5326: 13694 - K00020 mmsB, HIBADH 3-hydroxyisobutyrate dehydrogenase, at 461748 to 463259 13694
Group Condition mRNA_5322 mRNA_5323 mRNA_5324 mRNA_5325 mRNA_5326
13690
13691
13692
13693
13694
growth on ricinoleic acid YNB Ricinoleic Acid -0.0   -0.3 -0.6 -0.4
growth on oleic acid YNB Glucose -0.1   -0.3 -0.5 -0.1
growth on ricinoleic acid YNB Glucose -0.3   -0.4 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1   -0.2 -0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.6   0.2 -0.1 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.1   -0.3 0.0 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.9   0.1 0.1 0.2
growth on oleic acid YNB Oleic Acid -0.3   0.0 -0.1 -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.3   0.3 -0.4 0.0
auxotrophy YNB Glucose 75mM Arginine 0.2   -0.5 0.3 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.2   -0.5 0.4 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.2   0.1 0.0 -0.2
growth on ypd YPD -0.3   0.3 -0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4   -0.1 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -0.0 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   0.0 0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2   0.2 0.3 -0.1
auxotrophy YNB Glucose 0.2   -0.1 0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4   -0.1 0.1 -0.1
auxotrophy Dropout Complete 0.2   0.0 0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3   0.6 0.4 -0.2
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