Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5317: 13685 - K17498 SPN1, IWS1 transcription factor SPN1, at 441871 to 444778 13685 mRNA_5318: 13686 - KOG4315 G-patch nucleic acid binding protein, at 444861 to 446150 13686 mRNA_5319: 13687 - HMMPfam-Plasma-membrane choline transporter-PF04515, at 446863 to 449105 13687 mRNA_5320: 13688 - K03038 PSMD7, RPN8 26S proteasome regulatory subunit N8, at 449451 to 450740 13688 mRNA_5321: 13689 - K11108 RCL1 RNA 3'-terminal phosphate cyclase-like protein, at 451164 to 452723 13689
Group Condition mRNA_5317 mRNA_5318 mRNA_5319 mRNA_5320 mRNA_5321
13685
13686
13687
13688
13689
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.6   -0.3    
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1   -0.5    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   -0.4    
facs on lipid accumulation Sorted No BODIPY Gate 0.2   -0.6    
facs on lipid accumulation Sorted High BODIPY Gate -0.5   -0.0    
auxotrophy YNB Glucose 75mM Arginine -0.4   -0.0    
auxotrophy YNB Glucose 75mM Methionine -0.2   -0.2    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   -0.2    
auxotrophy YNB Glucose -0.1   -0.3    
ypd buoyancy 40 hrs Median Buoyancy -0.2   -0.1    
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   -0.1    
growth on oleic acid YNB Oleic Acid 0.1   -0.3    
ypd buoyancy 40 hrs No Buoyancy Separation 0.1   -0.3    
growth on oleic acid YNB Glucose 0.0   -0.2    
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.1    
ypd buoyancy 40 hrs High Buoyancy 0.0   -0.1    
auxotrophy Dropout Complete -0.1   -0.0    
growth on ricinoleic acid YNB Ricinoleic Acid 0.0   -0.1    
growth on ricinoleic acid YNB Glucose -0.2   0.2    
growth on ypd YPD -0.2   0.3    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   0.3    
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