Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_5311: 13679 - Hypothetical Protein, at 427613 to 428578 13679 mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429063 to 429953 13680 mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430404 to 433324 13681 mRNA_5314: 13682 - Hypothetical Protein, at 433901 to 435484 13682 mRNA_5315: 13683 - K06158 ABCF3 ATP-binding cassette, subfamily F, member 3, at 436318 to 439528 13683
Group Condition mRNA_5311 mRNA_5312 mRNA_5313 mRNA_5314 mRNA_5315
13679
13680
13681
13682
13683
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0   -0.5 0.2 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.1   -0.1 -0.1 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.2   -0.1 0.0 -0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.3   -0.3 0.0 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   -0.3 0.3 -0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1   -0.2 0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.0   0.3 -0.4 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.3   -0.3 0.2 0.2
ypd buoyancy 40 hrs High Buoyancy -0.1   0.1 -0.1 -0.1
growth on oleic acid YNB Glucose 0.1   -0.2 -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0   -0.3 -0.1 0.2
growth on ypd YPD -0.1   -0.1 -0.3 0.4
ypd buoyancy 40 hrs Median Buoyancy 0.2   0.0 -0.2 -0.0
growth on oleic acid YNB Oleic Acid 0.2   -0.1 0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0   0.2 -0.3 0.2
growth on ricinoleic acid YNB Glucose 0.1   0.1 -0.1 0.2
auxotrophy YNB Glucose 0.2   -0.0 0.4 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0   -0.4 0.2 0.6
auxotrophy YNB Glucose 75mM Methionine 0.2   0.2 0.4 0.0
auxotrophy YNB Glucose 75mM Arginine 0.3   -0.1 0.4 0.2
auxotrophy Dropout Complete 0.2   0.2 0.3 0.8
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