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Cofit
Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_5310: 13678 - Hypothetical Protein, at 425565 to 427309
13678
mRNA_5311: 13679 - Hypothetical Protein, at 427613 to 428578
13679
mRNA_5312: 13680 - K18182 COX16 cytochrome c oxidase assembly protein subunit 16, at 429063 to 429953
13680
mRNA_5313: 13681 - KOG0108 mRNA cleavage and polyadenylation factor I complex, subunit RNA15, at 430404 to 433324
13681
mRNA_5314: 13682 - Hypothetical Protein, at 433901 to 435484
13682
Group
Condition
mRNA_5310
mRNA_5311
mRNA_5312
mRNA_5313
mRNA_5314
13678
13679
13680
13681
13682
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-0.1
-0.1
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
0.0
-0.3
-0.1
growth on oleic acid
YNB Glucose
0.1
0.1
-0.2
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.0
-0.1
-0.2
0.1
growth on ypd
YPD
0.3
-0.1
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.0
-0.5
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.3
-0.3
-0.3
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.0
-0.4
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.0
0.2
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.0
0.3
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
0.0
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.1
-0.3
0.3
growth on oleic acid
YNB Oleic Acid
-0.1
0.2
-0.1
0.1
growth on ricinoleic acid
YNB Glucose
0.0
0.1
0.1
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.6
-0.2
-0.1
0.0
ypd buoyancy
40 hrs High Buoyancy
0.4
-0.1
0.1
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.4
0.3
-0.3
0.0
auxotrophy
YNB Glucose
0.0
0.2
-0.0
0.4
auxotrophy
YNB Glucose 75mM Methionine
0.1
0.2
0.2
0.4
auxotrophy
Dropout Complete
0.3
0.2
0.2
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.4
0.3
-0.1
0.4
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